BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B04LP1|AL427259
(953 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1691 1182 0.0
>3x_Contig1691
Length = 15574
Score = 1182 bits (595), Expect = 0.0
Identities = 624/631 (98%), Gaps = 3/631 (0%)
Strand = Plus / Minus
Query: 273 ttatatatattacatgtatgatattcactacatcatcctcctttaagagtaattattcaa 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11222 ttatatatattacatgtatgatattcactacatcatcctcctttaagagtaattattcaa 11163
Query: 333 cgacgtgttttctctttgggcataaacaggagcaaatatctaccactttaggaagagaag 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11162 cgacgtgttttctctttgggcataaacaggagcaaatatctaccactttaggaagagaag 11103
Query: 393 cgccaganatctgacggaaattacttgctttgcgtaagattattctctgtttactgtgtg 452
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11102 cgccagaaatctgacggaaattacttgctttgcgtaagattattctctgtttactgtgtg 11043
Query: 453 attactcaccaaacataatgtccttatgcttctttacttttttaccaataatcattcggc 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11042 attactcaccaaacataatgtccttatgcttctttacttttttaccaataatcattcggc 10983
Query: 513 aaaagtgatgatccattcaaagaatgtttgcagcaaaagcagtgaaaagataaaagaata 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10982 aaaagtgatgatccattcaaagaatgtttgcagcaaaagcagtgaaaagataaaagaata 10923
Query: 573 cacatatatatataacanggccgcaaacagtgtccgatatttattgacagaagacacatt 632
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10922 cacatatatatataacaaggccgcaaacagtgtccgatatttattgacagaagacacatt 10863
Query: 633 tgggtgtatttattttgaaccataatcgattgtkatgaatgaatttgcgcttttataggg 692
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10862 tgggtgtatttattttgaaccataatcgattgtaatgaatgaatttgcgcttttataggg 10803
Query: 693 gagadaaagactattacagcctttctcatataaggacatgcctacgaaggaatctgttaa 752
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10802 gagaaaaagactattacagcctttctcatataaggacatgcctacgaaggaatctgttaa 10743
Query: 753 gagaaaatgtcaattagccttggggcagtaatatacgtggcattgaagcctgttttcaag 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10742 gagaaaatgtcaattagccttggggcagtaatatacgtggcattgaagcctgttttcaag 10683
Query: 813 atatacctaatcctaggggttgggttcttgcttgcg-agtaccagattgttggtgtag-a 870
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 10682 atatacctaatcctaggggttgggttcttgcttgcgaagtaccagattgttggtgtagaa 10623
Query: 871 gctgctagatccgtttc-aacatggttgtga 900
||||||||||||||||| |||||||||||||
Sbjct: 10622 gctgctagatccgtttcaaacatggttgtga 10592
Score = 499 bits (251), Expect = e-141
Identities = 258/259 (99%), Gaps = 1/259 (0%)
Strand = Plus / Minus
Query: 1 gatcagaaaaattcc-cagtgacgatccattcaatgtcctctgttgtatattatgctgcc 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11495 gatcagaaaaattccacagtgacgatccattcaatgtcctctgttgtatattatgctgcc 11436
Query: 60 tttctcagaattcaaagataacaatgggactctcgtacttcgtgggtttgctccaactta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11435 tttctcagaattcaaagataacaatgggactctcgtacttcgtgggtttgctccaactta 11376
Query: 120 acactggaatcagtacactttcattcaattctcgaaaccactggagctttatcgatttta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11375 acactggaatcagtacactttcattcaattctcgaaaccactggagctttatcgatttta 11316
Query: 180 acaccgtagtttgtctttttaacgtcatggtcagatagagtgcttccattgcaaataatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11315 acaccgtagtttgtctttttaacgtcatggtcagatagagtgcttccattgcaaataatc 11256
Query: 240 aaataagcacggcccgctc 258
|||||||||||||||||||
Sbjct: 11255 aaataagcacggcccgctc 11237
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9700
Number of Sequences: 1807
Number of extensions: 9700
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)